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Chromosomal Rearrangements in 1,787 Cases of Acute Leukemia in Korea over 15 years. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-05-12
DongGeun Son,Ho Cheol Jang,Young Eun Lee,Yong Jun Choi,Joo Heon Park,Ha Jin Lim,Hyun-Jung Choi,Hee Jo Baek,Hoon Kook,Mihee Kim,Ga-Young Song,Seo-Yeon Ahn,Sung-Hoon Jung,Deok-Hwan Yang,Je-Jung Lee,Hyeonug-Joon Kim,Jae-Sook Ahn,Myung-Geun ShinBackground Chromosomal alterations serve as diagnostic and prognostic markers in acute leukemia. Given the evolving landscape of chromosomal abnormalities in acute leukemia, we previously studied these over two periods. In this study, we investigated the frequency of these abnormalities and clinical trends in acute leukemia in Korea across three time periods. Methods We retrospectively analyzed data
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Diagnostic Performance of Eight Blood-based Biomarkers in a Well-characterized Korean Cohort of Preclinical Alzheimer's Disease. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-05-12
Hyojin Chae,Hyejeong Kim,Yoon-Joo Kim,HyunYoung Ji,Eun-Jee Oh,Dong Won YangBackground With the introduction of disease-modifying treatments for Alzheimer's disease (AD), less invasive and widely accessible screening tests are urgently needed. We assessed eight blood-based biomarkers in a well-defined cohort of preclinical AD, including participants with subjective cognitive decline (SCD) and mild cognitive impairment (MCI). Methods Amyloid beta (Aβ) oligomerization tendency
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Increase in Sapovirus Infection in Korea After the COVID-19 Pandemic: A Six-and-a-half-year Retrospective Study. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-05-08
Su-Kyung Lee,You La Jeon,Eun-Jung Cho,Han-Sung Kim,Jae-Seok Kim,Wonkeun Song,Hyun Soo KimBackground Sapovirus is an increasingly recognized cause of acute gastroenteritis (AGE). Despite its significance, data on sapovirus epidemiology and genetic diversity in Korea are limited. Therefore, we examined sapovirus positivity rates over a 6.5-yr period and analyzed the genetic diversity of strains detected in 2022 in Korea. Methods We retrospectively analyzed 204,563 sapovirus multiplex PCR
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In-vitro Activities of Zoliflodacin and Solithromycin Against Neisseria gonorrhoeae Isolates from Korea. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-28
Kyoung Ho Roh,Nguyen Dinh Luong,Changseung Liu,Young Hee Seo,Hyukmin Lee,Magnus Unemo,Kyungwon LeeNovel antimicrobial agents are continually developed to address the global threat of multidrug-resistant Neisseria gonorrhoeae. Promising candidates include zoliflodacin and, possibly, solithromycin. We evaluated their in-vitro activities against gonococcal isolates collected in Korea. In total, 250 N. gonorrhoeae isolates obtained across Korea between 2016 and 2018 were used to determine the minimum
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Utility of ABO Genotyping by Integrating the ABO Gene into Diagnostic Gene Panels for Patients with Hematologic Malignancies. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-28
Yun Mi Park,Gye Cheol Kwon,Seon Young KimSerologic ABO typing might be hampered in some patients with hematologic malignancies. We performed ABO genotyping using next-generation sequencing as part of a routine hematologic malignancy gene panel to determine the ABO blood type of patients with hematologic malignancies. Targeted sequencing of seven ABO gene exons was performed within a hematologic malignancy gene panel for 520 patients diagnosed
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Evaluation of Six Large Language Models for Clinical Decision Support: Application in Transfusion Decision-making for RhD Blood-type Patients. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-28
Jong Kwon Lee,Sooin Choi,Sholhui Park,Sang-Hyun Hwang,Duck ChoBackground Large language models (LLMs) have the potential for clinical decision support; however, their use in specific tasks, such as determining the RhD blood type for transfusion, remains underexplored. Therefore, we evaluated the accuracy of six LLMs in addressing RhD blood type-related issues in Korean healthcare. Methods Fifteen multiple-choice and true/false questions, based on real-world transfusion
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Comparison of Two Quinupristin-dalfopristin Susceptibility Testing Methods and Two Interpretive Criteria for Enterococcus faecium Bloodstream Isolates from Korean Hospitals. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-28
Yong Jun Kwon,Ha Jin Lim,Soo Hyun Kim,Seung A Byun,Ga Yeong Lee,Ga-Gyeong Kim,Seok Hoon Jeong,Jeong Hwan Shin,Young Ah Kim,Young Uh,Jong Hee ShinEnterococcus faecium, particularly in its multidrug-resistant forms, causes invasive nosocomial infections. Given the limited data comparing the effectiveness of the European Committee on Antimicrobial Susceptibility Testing (EUCAST) and the CLSI clinical breakpoints (CBPs) for quinupristin-dalfopristin (QD) resistance and the need to evaluate their practical application, we retrospectively investigated
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Vitamin K Deficiency: Diagnosis and Management. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-24
Natalie Mathews,Catherine P M HaywardVitamin K (VK) deficiency (VKD) commonly causes coagulopathy across the age spectrum. The reduced form of VK is an essential cofactor for the post-translational γ-carboxylation of coagulation factors (Fs) II, VII, IX, and X; proteins C and S; and additional proteins. This carboxylation creates high-affinity calcium-binding sites that are important for their functions. VK is a fat-soluble vitamin, with
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Revolutionizing Laboratory Practices: Pioneering Trends in Total Laboratory Automation. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-07
Youngwon Nam,Hyung-Doo ParkTotal laboratory automation (TLA) is a transformative solution in clinical laboratories that addresses growing demands for operational efficiency, accuracy, and rapid turnaround times in patient care. TLA integrates advanced technologies across pre-analytical, analytical, and post-analytical phases, thereby streamlining workflows, reducing manual intervention, and enhancing QC. TLA adoption is driven
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Epidemiology of Nontyphoidal Salmonella Infections in Korean Children and Genetic Factors Associated with Extra-intestinal Invasion: A Whole-genome Sequencing Analysis. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-04
Hyun Mi Kang,Jiyon Chu,In Hyuk Yoo,In Young Yoo,Jeong-Ih Shin,Mi-Ran Seo,Yeun-Jun Chung,Seung-Hyun Jung,Yeon Joon ParkBackground Understanding the virulence and pathogenicity of invasive nontyphoidal Salmonella (iNTS) in children may support timely treatment and enable closer monitoring of chronic infections. iNTS epidemiology in Asia remains inadequately described. We analyzed the genetic diversity and virulence genes associated with extra-intestinal invasion in Korean children. Methods Salmonella isolates from children
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Identification of IGH::DUX4 Rearrangements Using RNA-sequencing in a Patient with ALL: A Case Report. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-03
Seoyoung Lim,Yu Jeong Choi,Eunju Yeom,Won Kee Ahn,Seung-Tae Lee,Jong Rak Choi,Seungmin Hahn,Saeam Shin -
Adjustment Formula for Harmonizing Triglyceride Values in the Korea National Health and Nutrition Examination Survey, 2005-2022. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-02
Rihwa Choi,Jong Do Seo,Eun-Jung Cho,Woochang Lee,Yeo-Min YunBackground Korea National Health and Nutrition Examination Survey (KNHANES) triglyceride testing changed from the glycerol blanking method (2005-2021) to the glycerol nonblanking method (2022). We converted triglyceride data from 2005-2021 to that obtained since 2022 with different analytical methods. Methods To develop a conversion equation, 98 fresh serum specimen pairs were compared using Passing-Bablok
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ABO Antibody Titer Testing Harmonization in Korea: A 5-Year Analysis of External Quality Control Data. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-02
Han Joo Kim,Yousun Chung,Sang-Hyun Hwang,Heung-Bum Oh,Hyungsuk Kim,Dae-Hyun KoCurrent ABO titration methods lack standardization and harmonization. We analyzed the consistency of ABO antibody titer testing among Korean laboratories and discussed future directions for standardization by analyzing external quality control data collected by the Korean Association of External Quality Assessment Service over 5 yrs (2019-2023). The analysis included the number of participating institutions
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Pharmacogenomic Testing in the Clinical Laboratory: Historical Progress and Future Opportunities. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-02
Ann M Moyer,John L BlackPharmacogenomics is a rapidly evolving field with a strong foundation in basic science dating back to 1960. Pharmacogenomic findings have been translated into clinical care through collaborative efforts of clinical practitioners, pharmacists, clinical laboratories, and research groups. The methods used have transitioned from targeted genotyping of relatively few variants in individual genes to multiplexed
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Pancreatic Cancer Detection and Differentiation from Chronic Pancreatitis: Potential Biomarkers Identified through a High-Throughput Multiplex Proteomic Assay and Machine Learning-Based Analysis. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-04-02
Young-Gon Kim,Sang-Mi Kim,Soo-Youn LeeBackground Pancreatic cancer (PC)-screening methods have limited accuracy despite their high clinical demand. Differential diagnosis of chronic pancreatitis (CP) poses another challenge for PC diagnosis. Therefore, we aimed to identify blood protein biomarkers for PC diagnosis and differential diagnosis of CP using high-throughput multiplex proteomic analysis. Methods Two independent cohorts (N=88
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Factors Influencing Fluorescence-activated Cell Sorting for Multiple Myeloma Fluorescence in situ Hybridization: Real-world Experience. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-25
Jaeguk Choi,Kyunghee Yu,Seung-Tae Lee,Saeam Shin,Jong Rak ChoiBackground FISH is the standard method for detecting cytogenetic abnormalities (CAs) in patients with multiple myeloma, and pre-enrichment of plasma cells is recommended to increase detection rates. However, optimal strategies to ensure sufficient plasma cell retrieval when standard enrichment techniques fail remain underexplored. We investigated factors influencing the success of fluorescence-activated
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Are Your Laboratory Data Reproducible? The Critical Role of Imprecision from Replicate Measurements to Clinical Decision-making. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-21
Abdurrahman CoskunMeasurement results of biological samples are not perfect and vary because of numerous factors related to the biological samples themselves and the measurement procedures used to analyze them. The imprecision in patients' laboratory data arising from the measurement procedure, known as analytical variation, depends on the conditions under which the data are collected. Additionally, the sample type
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Analytical Interference of Exemestane With Androstenedione Immunoassays. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-21
Marina Giralt,Roser Ferrer,Noelia Díaz-Troyano,Belén Vega,Manuel Luque-Ramírez,Sílvia Martínez,Bárbara Fernández,Irene Martínez,Aleix Fabregat,Eulalia Urgell,Ignacio Cardona,Gregori Casals,Héctor F Escobar-MorrealeBackground Exemestane, an aromatase inhibitor commonly used for breast cancer treatment, shares structural similarities with sex steroids analyzed in clinical laboratories. We aimed to investigate the influence of exemestane cross-reactivity in the measurement of sex steroids across various immunoassays. Methods We conducted a multicenter study involving measurements of androstenedione, testosterone
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Clinical Values of Combined Detection of Serum Cystatin C, β2-Microglobulin, and Urine Transferrin in Diagnosing Early Primary Glomerulonephritis. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-21
Xueqi Zhang,Xueying Bao,Cuicui Wu,Binxian Li,Mingcheng LiDespite primary glomerulonephritis (PGN) being a leading cause of chronic kidney disease and end-stage renal disease, specific and sensitive biomarkers for the early detection and monitoring of this condition are lacking. We evaluated the value of the combined detection of serum cystatin C (CYSC), β2-microglobulin (β2-MG), and urine transferrin (TRF) for diagnosing early-stage PGN. From May 2021 to
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Optimized Protocol for Producing Pathogen-Inactivated Double-Dose Platelet Concentrates From Six Pooled Buffy Coats. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-21
Marco Amato,Lisa Seekircher,Lena Tschiderer,Peter Willeit,Harald Schennach,Anita SillerBackground Pooled platelet (PLT) production methods differ worldwide. In Europe, the buffy coat (BC) method is predominantly used, with four to eight BCs being pooled to produce single- or double-dose PLT products. The European Directorate for the Quality of Medicines & HealthCare (EDQM) blood guide and Austrian legislation define a therapeutic PLT unit as ≥ 2 × 1011 PLTs/unit. We optimized the manufacturing
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Establishment of a Multilocus Sequence Typing Scheme for Pasteurella canis Using Isolates from Infected Humans and Diseased Companion Animals. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-20
Haruno Yoshida,Jae-Seok Kim,Takahiro Maeda,Mieko Goto,Yuzo Tsuyuki,Kenichi Shizuno,Takashi TakahashiBackground Multilocus sequence typing (MLST) is well-established for Pasteurella multocida but remains undeveloped for Pasteurella canis. We established MLST for P. canis using isolates from humans and companion animals in Japan and Korea to gain insights into its population biology. Methods We analyzed 39 and 22 isolates from companion animals and humans, respectively. We selected seven housekeeping
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Sensitivity and Specificity of an All-in-One Cartridge-Based Dengue Real-Time RT-PCR for Point-of-Care Detection and Serotyping of Dengue Virus in Samples From Indonesian Patients. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-17
Marsha S Santoso,Eggi Arguni,Bunga Rana,Mercy E Adiniko,Dionisius Denis,Endah Supriyati,Citra Indriani,Leily Trianty,Riris Andono Ahmad,Rintis Noviyanti,R Tedjo SasmonoBackground Dengue is a systemic, viral, mosquito-borne infection that continues to be a major public health issue in endemic regions in tropical and subtropical climates. Accurate tests for rapid diagnosis in point-of-care settings are important to reduce the fatality rates of severe dengue. We evaluated the diagnostic accuracy of the Standard M10 DENV 1-4 system (SD Biosensor, Gyeonggi, Korea), which
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Current Status of Standardization of Glomerular Filtration Rate Markers in Korea. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-17
Tae-Dong Jeong -
Agreement Evaluation in Statistical Analyses: Misconceptions and Key Features. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-17
Seungho Lee -
Application of Metabolic Biomarkers in Breast Cancer: A Literature Review. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-03-17
Anbok Lee,Ching-Wan LamBreast cancer is the most common cancer and the second leading cause of cancer death in women worldwide. Novel biomarkers for early diagnosis, treatment, and prognosis in breast cancer are needed and extensively studied. Metabolites, which are small molecules produced during metabolic processes, provide links between genetics, environment, and phenotype, making them useful biomarkers for diagnosis
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Clinical Implications of Circulating Tumor DNA in Multiple Myeloma and Its Precursor Diseases. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-02-28
Sung-Soo Park,Na Yung Kim,Ji-Young Lim,Jung Yeon Lee,Sujin Yun,Yeun-Jun Chung,Seung-Hyun Jung,Chang-Ki MinBackground Genetic alterations play a pivotal role in multiple myeloma (MM) development and therapeutic resistance. Traditionally, the genetic profiling of MM requires invasive bone marrow (BM) procedures; however, these procedures are associated with patient discomfort and cannot fully capture the spatial and temporal heterogeneity of the disease. Therefore, we investigated the clinical implications
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XN-1000 Hematology Analyzer as an Alternative to Flow Cytometry for Measuring Residual Cells in Blood Components. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-02-12
Anita Siller,Lisa Seekircher,Daniela Schmidt,Lena Tschiderer,Peter Willeit,Harald Schennach,Marco AmatoBackground Measuring residual cells in blood products is legally required for monitoring the manufacturing process and ensuring recipient safety. We compared the accuracy and performance of the two methodologies. Methods Residual white blood cells (rWBCs), red blood cells (rRBCs), and platelets (rPLTs) were measured in RBC concentrates (rWBCs), fresh frozen plasma (rWBCs, rRBCs, and rPLTs), and PLT
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Complement Activation and Hemolysis in Non-Human Primates Following Transfusion of Genetically Modified Pig Red Blood Cells. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-02-12
Hee Jung Kang,Juhye Roh,Haneulnari Lee,Eun Mi Park,Hye Won Lee,Ju Young Lee,Jeong Ho Hwang,Joohyun Shim,Kimyung ChoiBackground Pig red blood cells (RBCs) are rapidly eliminated when transfused into nonhuman primates (NHPs) because of immune reactions involving antibody binding and complement activation. We assessed the relationship between post-transfusion hemolysis and complement activation. Methods RBCs for transfusion were prepared from wild-type (WT) and genetically modified pigs and NHPs. After the withdrawal
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Prognostic Value of Residual Circulating Tumor DNA in Metastatic Pancreatic Ductal Adenocarcinoma. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-01-13
Hongkyung Kim,Jinho Lee,Mi Ri Park,Zisun Choi,Seung Jung Han,Dongha Kim,Saeam Shin,Seung-Tae Lee,Jong Rak Choi,Seung Woo ParkBackground Circulating tumor DNA (ctDNA) is a potential biomarker in pancreatic ductal adenocarcinoma (PDAC). However, studies on residual ctDNA in patients post-chemotherapy are limited. We assessed the prognostic value of residual ctDNA in metastatic PDAC relative to that of carbohydrate antigen 19-9 (CA19-9). Methods ctDNA analysis using a targeted next-generation sequencing panel was performed
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Advancing Natural Killer Cell Therapy: Genetic Engineering Strategies for Enhanced Cancer Immunotherapy. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-01-08
Joo Dong Park,Ha Eun Shin,Yeon Su An,Hye Jung Jang,Juwon Park,Se-Na Kim,Chun Gwon Park,Wooram ParkNatural killer (NK) cells are pivotal innate immune system components that exhibit spontaneous cytolytic activity against abnormal cells, such as infected and tumor cells. NK cells have shown significant promise in adoptive cell therapy because of their favorable safety profiles and minimal toxicity in clinical settings. Despite their advantages, the therapeutic application of unmodified NK cells faces
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Enhancing Clinical Cardiac Care: Predicting In-Hospital Cardiac Arrest With Machine Learning. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-01-08
Sollip Kim -
Abnormalities in Chromosomes 5 and 7 in Myelodysplastic Syndrome and Acute Myeloid Leukemia. Ann. Lab. Med. (IF 4.0) Pub Date : 2025-01-08
Tulene S Kendrick,Daria Buic,Kathy A Fuller,Wendy N ErberChromosomes 5 and 7 are large chromosomes that contain close to 1,000 genes each. Deletions of the long arms or loss of the entire chromosome (monosomy) are common defects in myeloid disorders, particularly MDS and AML. Loss of material from either chromosome 5 or 7 results in haploinsufficiency of multiple genes, with some implicated in leukemogenesis. Abnormalities of one or both occur in up to 15%
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CD69 Expression is Negatively Associated With T-Cell Immunity and Predicts Antiviral Therapy Response in Chronic Hepatitis B. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-12-20
Yurong Gu,Yanhua Bi,Zexuan Huang,Chunhong Liao,Xiaoyan Li,Hao Hu,Huaping Xie,Yuehua HuangBackground The function of CD69 expressed on T cells in chronic hepatitis B (CHB) remains unclear. We aimed to elucidate the roles of CD69 on T cells in the disease process and in antiviral therapy for CHB. Methods We enrolled 335 treatment-naive patients with CHB and 93 patients with CHB on antiviral therapy. CD69, antiviral cytokine production by T cells, T-helper (Th) cells, and inhibitory molecules
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Clinical Pharmacogenetic Testing and Application: 2024 Updated Guidelines by the Korean Society for Laboratory Medicine. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-12-17
John Hoon Rim,Young-Gon Kim,Sollip Kim,Rihwa Choi,Jee-Soo Lee,Seungman Park,Woochang Lee,Eun Young Song,Soo-Youn Lee,Sail Chun,In the era of precision medicine, pharmacogenetics has substantial potential for addressing inter-individual variability in drug responses. Although pharmacogenetics has been a research focus for many years, resulting in the establishment of several formal guidelines, its clinical implementation remains limited to several gene-drug combinations in most countries, including Korea. The main causes of
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Artificial Intelligence in Diagnostics: Enhancing Urine Test Accuracy Using a Mobile Phone-Based Reading System. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-12-16
Hyun Jin Kim,Manmyung Kim,Hyunjae Zhang,Hae Ri Kim,Jae Wan Jeon,Yuri Seo,Qute ChoiBackground Urinalysis, an essential diagnostic tool, faces challenges in terms of standardization and accuracy. The use of artificial intelligence (AI) with mobile technology can potentially solve these challenges. Therefore, we investigated the effectiveness and accuracy of an AI-based program in automatically interpreting urine test strips using mobile phone cameras, an approach that may revolutionize
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Reclassification of Acute Myeloid Leukemia According to the 2022 World Health Organization Classification and the International Consensus Classification Using Open-Source Data. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-12-16
Jiwon YunBackground In 2022, the revised WHO classification and International Consensus Classification (ICC) for myeloid neoplasms were published. We examined the impact of these guidelines on AML diagnoses alongside the 2022 European LeukemiaNet (ELN) recommendations on risk stratification. Methods We included 450 adult patients with newly diagnosed AML (non-acute promyelocytic leukemia) from the cBioPortal
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A Machine Learning Approach for Predicting In-Hospital Cardiac Arrest Using Single-Day Vital Signs, Laboratory Test Results, and International Classification of Disease-10 Block for Diagnosis. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-12-13
Haeil Park,Chan Seok ParkBackground Predicting in-hospital cardiac arrest (IHCA) is crucial for potentially reducing mortality and improving patient outcomes. However, most models, which rely solely on vital signs, may not comprehensively capture the patients' risk profiles. We aimed to improve IHCA predictions by combining vital sign indicators with laboratory test results and, optionally, International Classification of
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Advancing Laboratory Medicine Practice With Machine Learning: Swift yet Exact. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-11-26
Jiwon You,Hyeon Seok Seok,Sollip Kim,Hangsik ShinMachine learning (ML) is currently being widely studied and applied in data analysis and prediction in various fields, including laboratory medicine. To comprehensively evaluate the application of ML in laboratory medicine, we reviewed the literature on ML applications in laboratory medicine published between February 2014 and March 2024. A PubMed search using a search string yielded 779 articles on
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Ability of the Capillary Electrophoresis-based HbA1c Assay to Detect Rare Hemoglobin Variants. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-11-12
Melania Olivieri,Marco Rosetti,Giovanni Poletti,Massimo Maffei,Domenico Coviello,Massimo Mogni,Francesca Capalbo,Morandini Maria Caterina,Valentina Polli,Alice Clementoni,Evita Massari,Marta Monti,Sauro Maoggi,Tommaso Fasano -
Performance Evaluation of the LabGenius C-CT/NG-BMX Assay for Chlamydia trachomatis and Neisseria gonorrhoeae Detection. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-11-08
Yong Kwan Lim,Oh Joo Kweon,Ae Ja Park,Hongkyung Kim,Sumi Yoon,Tae-Hyoung Kim,Mi-Kyung LeeThe LabGenius C-CT/NG-BMX assay (LabGenius CT/NG; BIOMEDUX, Gyeonggi, Republic of Korea) is a recently developed real-time PCR assay that can simultaneously detect the sexually transmitted pathogens Chlamydia trachomatis (CT) and Neisseria gonorrhoeae (NG) in genitourinary specimens. We evaluated the analytical performance of this assay in comparison with BD MAX CT/GC/TV (Becton Dickinson, Franklin
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The First Korean Case of MAN1B1-Congenital Disorder of Glycosylation Diagnosed Using Whole-Exome Sequencing and Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-11-07
Kyoung Bo Kim,Gi Su Lee,Soyoung Shin,Dong-Chan Kim,Donggun Seo,Hyeongjin Kweon,Hyein Kang,Sunggyun Park,Do-Hoon Kim,Namhee Ryoo,Soyoung Lee,Jung Sook Ha -
Endogenous Thrombin Potential Level Helps Predict High Blood Loss in Patients Undergoing Cardiac Surgery. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-11-06
Yujin Jung,Jae Woong Choi,Ho Young Hwang,Ja Yoon Gu,Kyung Hwan Kim,Hyun Kyung Kim -
TP53 Mutation Status in Myelodysplastic Neoplasm and Acute Myeloid Leukemia: Impact of Reclassification Based on the 5th WHO and International Consensus Classification Criteria: A Korean Multicenter Study. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-11-05
Hyun-Young Kim,Saeam Shin,Jong-Mi Lee,In-Suk Kim,Boram Kim,Hee-Jin Kim,Yu Jeong Choi,Byunggyu Bae,Yonggoo Kim,Eunhui Ji,Hyerin Kim,Hyerim Kim,Jee-Soo Lee,Yoon Hwan Chang,Hyun Kyung Kim,Ja Young Lee,Shinae Yu,Miyoung Kim,Young-Uk Cho,Seongsoo Jang,Myungshin KimBackground TP53 mutations are associated with poor prognosis in myelodysplastic neoplasm (MDS) and AML. The updated 5th WHO classification and International Consensus Classification (ICC) categorize TP53-mutated MDS and AML as unique entities. We conducted a multicenter study in Korea to investigate the characteristics of TP53-mutated MDS and AML, focusing on diagnostic aspects based on updated classifications
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Carrier Frequency and Incidence of MUTYH-Associated Polyposis Based on Database Analysis in East Asians and Koreans. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-11-05
Jong Eun Park,Taeheon Lee,Eun Hye Cho,Mi-Ae Jang,Dongju Won,Boyoung Park,Chang-Seok Ki,Sun-Young KongBackground MUTYH-associated polyposis is an autosomal recessive disorder associated with an increased lifetime risk of colorectal cancer and a moderately increased risk of ovarian, bladder, breast, and endometrial cancers. We analyzed the carrier frequency and estimated the incidence of MUTYH-associated polyposis in East Asian and Korean populations, for which limited data were previously available
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A Case of Bidirectional ABO- and RhD-Incompatible Liver Transplantation in a Mongolian Patient With Asian-Type DEL. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-10-31
Takho Kang,Ryoojung Choi,Dong-Sik Kim,Duck Cho,Dae Won Kim -
Clinical Outcomes and Molecular Characteristics of Bacteroides fragilis Infections. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-10-31
Bongyoung Kim,Myungsook Kim,Kyungwon Lee,Yangsoon LeeBacteroides fragilis is the most common opportunistic anaerobic pathogen. In the absence of appropriate antimicrobial therapy, mortality rates associated with B. fragilis group infections can reach as high as 50%. Therefore, we aimed to elucidate the clinical characteristics and outcomes of B. fragilis infections and the molecular genetic characteristics of B. fragilis isolates. Forty B. fragilis clinical
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Laboratory Data as a Potential Source of Bias in Healthcare Artificial Intelligence and Machine Learning Models. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-10-24
Hung S LuuArtificial intelligence (AI) and machine learning (ML) are anticipated to transform the practice of medicine. As one of the largest sources of digital data in healthcare, laboratory results can strongly influence AI and ML algorithms that require large sets of healthcare data for training. Embedded bias introduced into AI and ML models not only has disastrous consequences for quality of care but also
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Reanalysis of Next-generation Sequencing Data in Patients With Hypertrophic Cardiomyopathy: Contribution of Spliceogenic MYBPC3 Variants in an Italian Cohort. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-10-02
Silvia Caroselli,Marco Fabiani,Caterina Micolonghi,Camilla Savio,Giacomo Tini,Beatrice Musumeci,Erika Pagannone,Aldo Germani,Fabio Libi,Vincenzo Visco,Antonio Pizzuti,Camillo Autore,Simona Petrucci,Speranza Rubattu,Maria PianeHypertrophic cardiomyopathy (HCM) is a genetic cardiac muscle disease characterized by clinical and genetic heterogeneity. Genetic testing can reveal the presence of disease-causing variants in genes encoding sarcomere proteins. However, it yields inconclusive or negative results in 40-60% of HCM cases, owing to, among other causes, technical limitations such as the inability to detect pathogenic intronic
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Toward High-Quality Real-World Laboratory Data in the Era of Healthcare Big Data. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-09-30
Sollip Kim,Won-Ki MinWith Industry 4.0, big data and artificial intelligence have become paramount in the field of medicine. Electronic health records, the primary source of medical data, are not collected for research purposes but represent real-world data; therefore, they have various constraints. Although structured, laboratory data often contain unstandardized terminology or missing information. The major challenge
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Feasibility of Circulating Tumor DNA Detection in the Cerebrospinal Fluid of Patients With Central Nervous System Involvement in Large B-Cell Lymphoma. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-09-30
Seok Jin Kim,Jin Ju Kim,Mi Ri Park,Bon Park,Kyung Ju Ryu,Sang Eun Yoon,Won Seog Kim,Saeam Shin,Seung-Tae LeeWe explored the utility of cerebrospinal fluid (CSF) circulating tumor DNA (ctDNA) sequencing as a noninvasive diagnostic tool for detecting central nervous system (CNS) involvement in patients with diffuse large B-cell lymphoma (DLBCL). Secondary CNS involvement in DLBCL, although rare (~5% of cases), presents diagnostic and prognostic challenges during systemic disease progression or relapse. Effective
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Evaluation of the Disk Diffusion Test for Bacteroides fragilis Group Clinical Isolates. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-09-30
Yangsoon Lee,Mi-Hyun Bae,Hyukmin Lee,Myungsook Kim,Kyungwon LeeBackground Bacteroides fragilis group (BFG) isolates are the most frequently isolated gram-negative anaerobic bacteria and exhibit higher levels of antimicrobial resistance than other anaerobic bacteria. Reliable susceptibility testing is needed because of reports of resistance to the most active antibiotics. Recently, the European Committee on Antimicrobial Susceptibility Testing (EUCAST) introduced
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Rare Non-Cryptic NUP98 Rearrangements Associated With Myeloid Neoplasms and Their Poor Prognostic Impact. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-09-30
Min-Seung Park,Boram Kim,Jun Ho Jang,Chul Won Jung,Hee-Jin Kim,Hyun-Young KimBackground NUP98 rearrangements (NUP98r), associated with various hematologic malignancies, involve more than 30 partner genes. Despite their clinical significance, reports on the clinicopathological characteristics of rare NUP98r remain limited. We investigated the characteristics of patients with myeloid neoplasms harboring NUP98r among those identified as having 11p15 translocation in chromosomal
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Interinstitutional Comparison of Vancomycin Area Under the Concentration-Time Curve Estimation in Korea: Need for Standardized Operational Protocols for Therapeutic Drug Monitoring Consultation. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-09-13
Hyun-Ki Kim,Mikyoung Park,Jong Do Seo,Tae-Dong Jeong,Misuk JiVancomycin, a vital antibiotic for treating gram-positive bacterial infections, requires therapeutic drug monitoring (TDM) because of its substantial pharmacokinetic variability. While traditional TDM relies on steady-state trough concentrations, recent guidelines advocate the area under the concentration-time curve (AUC) as the target index. However, detailed protocols for AUC estimation are lacking
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Development and Validation of a Novel Isotope Dilution-Ultraperformance Liquid Chromatography-Tandem Mass Spectrometry Method for Serum C-Peptide. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-08-23
Sung-Eun Cho,Jungsun Han,Juyoung You,Jun Hyung Lee,Ahram Yi,Sang Gon Lee,Eun Hee LeeBackground Mass spectrometry (MS) methods exhibit higher accuracy and comparability in measuring serum C-peptide concentrations than immunoassays. We developed and validated a novel isotope dilution-ultraperformance liquid chromatography-tandem MS (ID-UPLC-MS/MS) assay to measure serum C-peptide concentrations. Methods Sample pretreatment involved solid-phase extraction, ion-exchange solid-phase extraction
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Aberrant Splicing in PKD2 in a Family of Korean Patients With Autosomal Dominant Polycystic Kidney Disease. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-08-22
Soo-Young Yoon,Jin Sug Kim,Kyung Sun Park -
Detecting M-Protein via Mass Spectrometry and Affinity Beads: Enrichment With Mixed Kappa-Lambda Beads Enables Prompt Application in Clinical Laboratories. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-08-20
Jikyo Lee,Jung Hoon Choi,Eun-Hee Kim,Jihyun Im,Heeyoun Hwang,Seojin Yang,Joon Hee Lee,Kyunghoon Lee,Junghan Song,Seungman Park,Sang Hoon SongBackground Detecting monoclonal protein (M-protein), a hallmark of plasma cell disorders, traditionally relies on methods such as protein electrophoresis, immune-electrophoresis, and immunofixation electrophoresis (IFE). Mass spectrometry (MS)-based methods, such as matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) and electrospray ionization-quadrupole time-of-flight (ESI-qTOF)
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Germline Mutations and Phenotypic Associations in Korean Patients With Pheochromocytoma and Paraganglioma: A Multicenter Study and Literature Review. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-07-29
Kwan Hoon Jo,Jaewoong Lee,Jaeeun Yoo,Hoon Seok Kim,Eun Sook Kim,Je Ho Han,Yi Sun Jang,Jae-Seung Yun,Jang Won Son,Soon Jib Yoo,Seung Hwan Lee,Dong Jun Lim,Hyuk-Sang Kwon,Seungok Lee,Sungdae Moon,Myungshin KimGenetic testing is recommended for all patients with pheochromocytomas and paragangliomas (PPGL) to establish genotype-phenotype associations. We investigated germline mutations in 59 patients with PPGL at six Korean university hospitals using next-generation sequencing (NGS) targeting 38 PPGL-associated genes, including those recommended by the Korean PPGL Task Force. Germline mutations were identified
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Assessing the Relevance of Non-molecular Prognostic Systems for Myelodysplastic Syndrome in the Era of Next-Generation Sequencing. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-07-26
Marco Lincango, Verónica Andreoli, Hernán García Rivello, Andrea Bender, Ana I Catalán, Marilina Rahhal, Rocío Delamer, Mariana Asinari, Adrián Mosquera Orgueira, María Belén Castro, María José Mela Osorio, Alicia Navickas, Sofia Grille, Evangelina Agriello, Jorge Arbelbide, Ana Lisa Basquiera, Carolina B BelliThe Molecular International Prognostic Scoring System (IPSS-M) has improved the prediction of clinical outcomes for myelodysplastic syndromes (MDS). The Artificial Intelligence Prognostic Scoring System for MDS (AIPSS-MDS), based on classical clinical parameters, has outperformed the IPSS, revised version (IPSS-R). For the first time, we validated the IPSS-M and other molecular prognostic models and
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Reclassification of Myelodysplastic Neoplasms According to the 2022 World Health Organization Classification and the 2022 International Consensus Classification Using Open-Source Data: Focus on SF3B1- and TP53-mutated Myelodysplastic Neoplasms. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-07-24
Jiwon Yun, Hye Ryoun KimIn 2022, the WHO and International Consensus Classification (ICC) published diagnostic criteria for myelodysplastic neoplasms (MDSs). We examined the influence of the revised diagnostic criteria on classifying MDSs in a large population.
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Effect of Blood Collection Tubes on Vitamin D Immunoassay Results. Ann. Lab. Med. (IF 4.0) Pub Date : 2024-07-23
Hyojin Chae,Sangyoon Lee,Ae-Ran Choi,Sung-Eun Cho,Eun-Jee Oh