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Preferential tumor targeting of HER2 by iPSC-derived CAR T cells engineered to overcome multiple barriers to solid tumor efficacy Cell Stem Cell (IF 19.8) Pub Date : 2025-06-04
Martin P. Hosking, Soheila Shirinbak, Kyla Omilusik, Shilpi Chandra, Mika K. Kaneko, Angela Gentile, Susumu Yamamoto, Bishwas Shrestha, Joy Grant, Megan Boyett, Demetrio Cardenas, Hannah Keegan, Samad Ibitokou, Carolina Pavon, Takahiro Mizoguchi, Tatsuya Ihara, Daisuke Nakayama, Ramzey Abujarour, Tom T. Lee, Raedun Clarke, Bahram Valamehr -
Transcription-templated assembly of the nucleolus in the Caenorhabditis elegans embryo Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Nishant KodanRabeya HussainiStephanie C. WeberJane KondevLishibanya MohapatraaSchool of Physics and Astronomy, College of Science, Rochester Institute of Technology, Rochester, NY 14623bDepartment of Physics, New York University, New York, NY 10003cDepartment of Biology, McGill University, Montreal, QC H3A 1B1, CanadadDepartment of Physics, McGill University, Montreal, QC H3A 2T8, CanadaeDepartmentProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceHow membraneless organelles like nucleolus assemble within cells is not well understood. Recent experiments suggest that transcription of ribosomal RNA actively drives nucleolar assembly. Our proposed model of active transcription-templated ...
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Can increasing the size and flexibility of a molecule reduce decoherence and prolong charge migration? Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Alan ScheideggerNikolay V. GolubevJiří J. L. VaníčekaLaboratory of Theoretical Physical Chemistry, Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne, Lausanne CH-1015, SwitzerlandbDepartment of Physics, University of Arizona, Tucson, AZ 85721Proceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceTogether with tunneling and entanglement, coherence belongs among the hallmarks of quantum mechanics and among the prerequisites for building quantum devices. In attochemistry, the loss of electronic coherence induced by nuclear motion ...
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Solution structure and synaptic analyses reveal determinants of bispecific T cell engager potency Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Alexander LeithnerOskar StauferTanmay MitraFalk LibertaSalvatore ValvoMikhail KutuzovHannah DadaJacob SpaethWeijie ZhouFelix SchieleSophia ReindlHerbert NarStefan HoererMaureen CramesStephen ComeauDavid YoungSarah LowEdward JenkinsSimon J. DavisDavid KlenermanAndrew NixonNoah PefaurDavid WyattOmer DushekSrinath KasturiranganMichael L. DustinaThe Kennedy Institute of Rheumatology, Nuffield DepartmentProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceBispecific T cell engagers (TcEs) are immunotherapeutic drugs that trigger the destruction of cancer cells by linking T cells to cancer cells through specific surface molecules (antigens). We designed a series of TcEs with varying distances ...
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Estimating wage disparities using foundation models Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Keyon VafaSusan AtheyDavid M. BleiaHarvard Data Science Initiative, Harvard University, Cambridge, MA 02138bGraduate School of Business, Stanford University, Stanford, CA 94305cStanford Institute for Human-Centered Artificial Intelligence, Stanford University, Stanford, CA 94305dDepartment of Computer Science, Columbia University, New York, NY 10027eDepartment of Statistics, Columbia University, NewProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceUnderstanding differences in outcomes between social groups—such as wage gaps between men and women—remains a central challenge in social science. While researchers have long studied how observable factors contribute to these differences, ...
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Exploring diverse supramolecular tessellation through hierarchical assemblies of nonalternant nanographene Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Jian SunZiqi DengDavid Lee PhillipsJunzhi LiuaDepartment of Chemistry, The University of Hong Kong - Chinese Academy of Sciences Joint Laboratory on New Materials and Shanghai-Hong Kong Joint Laboratory on Chemical Synthesis, The University of Hong Kong, Hong Kong 999077, ChinabState Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Hong Kong 999077, ChinacMaterials Innovation InstituteProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceThe tessellated material is poised to become a fascinating subject in materials science, following the initial exploration of quasicrystals. Specifically, supramolecular tessellation at the molecular level has primarily been observed in ...
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Environmental DNA adsorption to chitin can promote horizontal gene transfer by natural transformation Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Jacob D. HoltYixuan PengTriana N. DaliaAnkur B. DaliaCarey D. NadellaDepartment of Biological Sciences, Dartmouth, Hanover, NH 03755bDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH 03755cDepartment of Biology, Indiana University, Bloomington, IN 47405Proceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceThe human pathogen and marine microbeVibrio choleraehas been shown to activate extracellular DNA uptake and transformation when in contact with chitin, the most abundant structural biomaterial in the oceans and a primary source of nutrition ...
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Genomic analyses identify 15 risk loci and reveal HDAC2, SOX2-OT, and IGF2BP2 in a naturally occurring canine model of gastric cancer Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Shawna R. CookSanne HugenJessica J. HaywardThomas R. FamulaJanelle M. BelangerElizabeth McNielHille FietenAnita M. OberbauerPeter A. J. LeegwaterElaine A. OstranderPaul J. J. MandigersJacquelyn M. EvansaBaker Institute for Animal Health, College of Veterinary Medicine, Cornell University, Ithaca, NY 14853bDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, IthacaProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceGastric cancer is the fifth most common cause of human cancer deaths, but the genetic underpinnings are poorly understood. Harnessing the genetic homogeneity of purebred dogs, we identify 18 loci governing gastric cancer susceptibility in a ...
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Himalayan “S-type” granite generated from I-type sources Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Huixia DingZeming ZhangMatthew J. KohnaState Key Laboratory of Geological Processes and Mineral Resources, and School of Earth Sciences and Resources, China University of Geosciences, Beijing 100083, ChinabInstitute of Geology, Chinese Academy of Geological Sciences, Beijing 100037, ChinacDepartment of Geosciences, Boise State University, Boise, ID 83725Proceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceClassically, granites are separated into two broad categories—“I-type” vs. “S-type”—representing different igneous vs. (meta)sedimentary rock sources for melting. Their geochemistry differs for diverse geochemical systems. Himalayan granites ...
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Proofreading and single-molecule sensitivity in T cell receptor signaling by condensate nucleation Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
William L. WhiteHailemikael K. YirdawAriel J. Ben-SassonJay T. GrovesDavid BakerHao Yuan KuehaDepartment of Bioengineering, University of Washington, Seattle, WA 98195bInstitute for Protein Design, University of Washington, Seattle, WA 98195cDepartment of Chemistry, University of California Berkeley, Berkeley, CA 94720dInstitute for Digital Molecular Analytics and Science, Nanyang Technological UniversityProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceTo fight infections and cancer, T cells must selectively recognize low levels of foreign peptides from pathogens or cancer cells, but the mechanisms that enable these properties remain unclear. Using computational modeling and experiments, we ...
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Rhomboid-mediated cleavage of the immune receptor XA21 protects grain set and male fertility in rice Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Satyam VergishXiaoen HuangGuiyun ZhangBeatriz de Toledo FranceschiJian-Liang LiXiao-Xia WuJoana NurajJose C. Huguet-TapiaApekshya ParajuliXiuhua ChenRitu ShekharDali LiuWu-Ming XiaoShijuan DouGuo-zhen LiuErica M. GossLiya PiSixue ChenKaren E. KochWen-Yuan SongaDepartment of Plant Pathology, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL 32611bIntegrative BioinformaticsProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceThe protection of key developmental processes from the immune system, while allowing the immune system to defend against pathogens, is central for the survival and reproduction of nearly all multicellular organisms. The rice immune receptor ...
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Task difficulty modulates the effect of mind wandering on phase dynamics Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Zhengkun LongGeorg NorthoffXiaolan FuaState Key Laboratory of Cognitive Science and Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing 100101, ChinabDepartment of Psychology, University of Chinese Academy of Sciences, Beijing 100049, ChinacSchool of Psychology, Shenzhen University, Shenzhen, Guangdong 518060, ChinadMind, Brain Imaging and Neuroethics Research Unit, The Royal’sProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceWe demonstrate that external (sensory and motor processing) and internal cognition (mind wandering) are dynamically interdependent. Easier external tasks require fewer executive resources, leaving more cognitive resources for internal mind ...
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Modular arrangement of synaptic and intrinsic homeostatic plasticity within visual cortical circuits Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Wei WenAdriana M. PradaGina G. TurrigianoaDepartment of Biology, Brandeis University, Waltham, MA 02453Proceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceHomeostatic plasticity maintains normal brain functions by constraining various network features of neural circuits, yet how this is realized on the cellular level remains unknown. Synaptic and intrinsic forms of homeostatic plasticity adjust ...
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CRISPR screen reveals a simultaneous targeted mechanism to reduce cancer cell selenium and increase lipid oxidation to induce ferroptosis Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Sophia M. LamperisKaylin M. McMahonAndrea E. CalvertJonathan S. RinkKarthik VasanMadhura R. PandkarEliana U. CrentsilZachary R. ChalmersNatalie R. McDonaldCameron J. KosmalaMarcelo G. BoniniDaniela MateiLeo I. GordonNavdeep S. ChandelC. Shad ThaxtonaDepartment of Urology, Northwestern University, Feinberg School of Medicine, Chicago, IL 60611bSimpson Querrey Institute for BioNanotechnology, NorthwesternProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceFerroptosis is an iron-dependent cell death mechanism that results from increased oxidation of cell membrane lipids. We conducted a CRISPR-based positive selection screen in clear cell ovarian cancer cells treated with a nanoparticle drug to ...
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Phage-induced protection against lethal bacterial reinfection Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Yikun XingHaroldo J. Hernandez SantosLing QiuSamantha R. RitterJacob J. ZulkRachel LahowetzKathryn A. PatrasAusten L. TerwilligerAnthony W. MaressoaTAILOR Labs, Baylor College of Medicine, Houston, TX 77030bDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX 77030cAlkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, TX 77030Proceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceIn 2021, antimicrobial-resistant bacteria were responsible for 1.14 million deaths and associated with 4.71 million deaths globally. Patients who experience sepsis often face a higher risk of reinfections and hospital readmissions. To combat ...
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Oxr1 and Ncoa7 regulate V-ATPase to achieve optimal pH for glycosylation within the Golgi apparatus and trans-Golgi network Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Shin-ichiro YoshimuraTomoaki SobajimaMasataka KuniiAkihiro HaradaaDepartment of Cell Biology, Graduate School of Medicine, The University of Osaka, Suita 565-0871, Osaka, JapanProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceIn the secretory pathway, the pH within organelles is gradually acidified, starting at 7.1 to 7.2 in the endoplasmic reticulum, decreasing to 6.0 to 6.7 in the Golgi apparatus/trans-Golgi network (Golgi/TGN), and reaching 4.5 to 5.0 in ...
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Label-free high-throughput live-cell sorting of genome-wide random mutagenesis libraries for metabolic traits by Raman flow cytometry Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-05-30
Xixian WangSen WangZhidian DiaoXibao HouYanhai GongQing SunJiaping ZhangLihui RenYuandong LiYuetong JiWei ShenYifeng YinShi HuangXiaojin SongQiu CuiYingang FengJian XuBo MaaState Key Laboratory of Photoelectric Conversion and Utilization of Solar Energy, Key Laboratory of Shandong Energy Biological Genetic Resources, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of SciencesProceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025. SignificanceSorting cells with target metabolic functions from a mutant pool exhibiting substantial genetic diversity is often the rate-limiting step in synthetic biology. Here, we developed a label-free, high-throughput Raman-activated cell sorting ...
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In This Issue Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Proceedings of the National Academy of Sciences, Volume 122, Issue 22, June 2025.
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Extracellular exosomal RNAs are glyco-modified Nat. Cell Biol. (IF 17.3) Pub Date : 2025-06-04
Sunny Sharma, Xinfu Jiao, Jun Yang, Kelvin Y. Kwan, Megerditch Kiledjian -
Science-integrity project will root out bad medical papers ‘and tell everyone’ Nature (IF 50.5) Pub Date : 2025-06-04
Group behind Retraction Watch aims to pinpoint the most influential flawed health data.
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Genomics pioneer fired from firm he founded: ‘It was not easy to domesticate me’ Nature (IF 50.5) Pub Date : 2025-06-04
Kári Stefánsson, who last month left the Icelandic genetics company deCODE, spoke to Nature about his legacy.
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Why we should protect the high seas from all extraction, forever Nature (IF 50.5) Pub Date : 2025-06-04
Callum M. Roberts, Emilia Dyer, Sylvia A. Earle, Andrew Forrest, Julie P. Hawkins, Ove Hoegh-Guldberg, Jessica J. Meeuwig, Daniel Pauly, Stuart L. Pimm, U. Rashid Sumaila, Johan Rockström, Mark LynasExploitation of the high seas risks doing irreversible damage to biodiversity, climate stability and ocean equity. A consensus must be built now to save them.
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How a mysterious epidemic of kidney disease is killing thousands of young men Nature (IF 50.5) Pub Date : 2025-06-04
Repeated damage from extreme heat over time seems to be a leading factor causing kidneys to fail.
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‘You’re just not welcome’: researchers grapple with US plan to revoke Chinese student visas Nature (IF 50.5) Pub Date : 2025-06-03
Scientists are eyeing their legal options in anticipation of new immigration actions.
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Daily briefing: NIH foreign-grant cuts could leave thousands without care worldwide Nature (IF 50.5) Pub Date : 2025-06-03
Cuts to US ‘foreign subawards’ will abruptly end hundreds of clinical trials abroad. Plus, an mpox outbreak is overwhelming Sierra Leone’s health system and a rock with a painted dot that just might represent a nose.
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Lactate dehydrogenase B facilitates disulfidptosis and exhaustion of tumour-infiltrating CD8+ T cells Nat. Cell Biol. (IF 17.3) Pub Date : 2025-06-03
Jie Wan, Jian-Hong Shi, Min Shi, Haiyan Huang, Zhen Zhang, Wenyan Li, Chenyue Guo, Rujuan Bao, Xiaoyan Yu, Qiaoqiao Han, Xian Du, Song Li, Youqiong Ye, Xingang Cui, Xia Li, Jing-Hua Li, Qiang Zou -
Base editors model mitochondrial disease Nat. Biotechnol. (IF 33.1) Pub Date : 2025-06-03
Patrick Buchholz, Jens Boch -
Resurrecting a miniature Cas9 ancestor for genome and epigenome editing Nat. Biotechnol. (IF 33.1) Pub Date : 2025-06-03
Gabriel L. Butterfield, Charles A. Gersbach -
Powering new therapeutics with precision mitochondrial editing Nat. Biotechnol. (IF 33.1) Pub Date : 2025-06-03
More precise base editors make mitochondrial DNA editing efficient enough to model disease and correct pathogenic mutations in rodents, but they are slow to move into clinical trials.
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A mitochondrial disease model is generated and corrected using engineered base editors in rat zygotes Nat. Biotechnol. (IF 33.1) Pub Date : 2025-06-03
Liang Chen, Changming Luan, Mengjia Hong, Meng Yuan, Hao Huang, Debo Gao, Xinyuan Guo, Zhengxin Chen, Yongmei Li, Lei Yang, Zongyi Yi, Wensheng Wei, Mingyao Liu, Liangcai Gao, Honghui Han, Dali Li -
Efficient mitochondrial A-to-G base editors for the generation of mitochondrial disease models Nat. Biotechnol. (IF 33.1) Pub Date : 2025-06-03
Liang Chen, Mengjia Hong, Changming Luan, Meng Yuan, Yiming Wang, Xinyuan Guo, Yue Fang, Hao Huang, Xiaohua Dong, Hongyi Gao, Dan Zhang, Xi Chen, Dihao Meng, Molin Huang, Zongyi Yi, Mingyao Liu, Wensheng Wei, Liangcai Gao, Gaojie Song, Xiaoming Zhou, Dali Li -
Improving gene isoform quantification with miniQuant Nat. Biotechnol. (IF 33.1) Pub Date : 2025-06-03
Haoran Li, Dingjie Wang, Qi Gao, Puwen Tan, Yunhao Wang, Xiaoyu Cai, Aifu Li, Yue Zhao, Andrew L. Thurman, Seyed Amir Malekpour, Ying Zhang, Roberta Sala, Andrea Cipriano, Chia-Lin Wei, Vittorio Sebastiano, Chi Song, Nancy R. Zhang, Kin Fai Au -
Should there be a national holiday in honour of chemists? Nature (IF 50.5) Pub Date : 2025-06-03
Snippets from Nature’s past.
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Address the psychological toll of kidney disease Nature (IF 50.5) Pub Date : 2025-06-03
Letter to the Editor
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Trade wars could affect food security in low-income nations Nature (IF 50.5) Pub Date : 2025-06-03
Letter to the Editor
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European Union’s strict conservation targets should guide global marine policy Nature (IF 50.5) Pub Date : 2025-06-03
Letter to the Editor
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Disaster relief needs community trust — authorities must earn it Nature (IF 50.5) Pub Date : 2025-06-03
Governments and institutions must shift from top-down approaches to collaborations with local communities.
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Illustrators call out journals and news sites for using AI art Nature (IF 50.5) Pub Date : 2025-06-03
Bot-made art undermines research and public trust in science, say illustrators frustrated by inaccurate and outlandish depictions.
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Exclusive: Inside the thriving wild-animal markets that could start the next pandemic Nature (IF 50.5) Pub Date : 2025-06-03
Live-animal markets are a natural laboratory for viruses to evolve and spark deadly outbreaks, yet scientists lack support to study the risks they pose.
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Brain-reading devices raise ethical dilemmas — researchers propose protections Nature (IF 50.5) Pub Date : 2025-06-03
Delegates to a United Nations meeting on neurotechnology ethics have devised the first set of global guidelines on maintaining users’ privacy.
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Daily briefing: CAR-T proves its worth in hard-to-treat solid tumours Nature (IF 50.5) Pub Date : 2025-06-02
A clinical trial of CAR T cells is among the first to show that the treatment can work for solid tumours. Plus, humpbacks’ big eyes are nearsighted and how researchers are turbocharging ginseng.
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Towards trustworthiness of precision medicine research for people with disabilities Nat. Genet. (IF 31.7) Pub Date : 2025-06-02
Alejandra Aguirre, Sandra Soo-Jin Lee, Shawneequa Callier, Paul Spicer, Maya SabatelloPeople with disabilities are under-represented in general (non-disability-specific) precision medicine research (PMR), limiting access to its benefits. We examine key reasons for this, focusing on the role of (dis)trust, and identify areas for further inquiry to guide researchers and enhance PMR’s trustworthiness for people with disabilities.
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KDM4C inhibition blocks tumor growth in basal breast cancer by promoting cathepsin L-mediated histone H3 cleavage Nat. Genet. (IF 31.7) Pub Date : 2025-06-02
Zheqi Li, Guillermo Peluffo, Laura E. Stevens, Xintao Qiu, Marco Seehawer, Amatullah Tawawalla, Xiao-Yun Huang, Shawn B. Egri, Shaunak Raval, Maeve McFadden, Clive S. D’Santos, Eva Papachristou, Natalie L. Kingston, Jun Nishida, Kyle E. Evans, Ji-Heui Seo, Kendell Clement, Daniel Temko, Muhammad Ekram, Rong Li, Matthew G. Rees, Melissa M. Ronan, Jennifer A. Roth, Anton Simeonov, Stephen C. Kales, Ganesha -
Longitudinal and multisite sampling reveals mutational and copy number evolution in tumors during metastatic dissemination Nat. Genet. (IF 31.7) Pub Date : 2025-06-02
Karena Zhao, Joris Vos, Stanley Lam, Lillian A. Boe, Daniel Muldoon, Catherine Y. Han, Cristina Valero, Mark Lee, Conall Fitzgerald, Andrew S. Lee, Manu Prasad, Swati Jain, Xinzhu Deng, Timothy A. Chan, Michael F. Berger, Chaitanya Bandlamudi, Xi Kathy Zhou, Luc G. T. Morris -
Engineering next-generation microfluidic technologies for single-cell phenomics Nat. Genet. (IF 31.7) Pub Date : 2025-06-02
Camille L. G. Lambert, Guido van Mierlo, Johannes J. Bues, Orane J. Guillaume-Gentil, Bart Deplancke -
Phylogenetic inference reveals clonal heterogeneity in circulating tumor cell clusters Nat. Genet. (IF 31.7) Pub Date : 2025-06-02
David Gremmelspacher, Johannes Gawron, Barbara M. Szczerba, Katharina Jahn, Francesc Castro-Giner, Jack Kuipers, Jochen Singer, Francesco Marass, Ana Gvozdenovic, Selina Budinjas, Heike Pueschel, Cyrill A. Rentsch, Alfred Zippelius, Viola Heinzelmann-Schwarz, Christian Kurzeder, Walter Paul Weber, Christoph Rochlitz, Marcus Vetter, Niko Beerenwinkel, Nicola Aceto -
Author Correction: DNA-guided transcription factor interactions extend human gene regulatory code Nature (IF 50.5) Pub Date : 2025-06-03
Zhiyuan Xie, Ilya Sokolov, Maria Osmala, Xue Yue, Grace Bower, J. Patrick Pett, Yinan Chen, Kai Wang, Ayse Derya Cavga, Alexander Popov, Sarah A. Teichmann, Ekaterina Morgunova, Evgeny Z. Kvon, Yimeng Yin, Jussi TaipaleCorrection to: Nature https://doi.org/10.1038/s41586-025-08844-z Published online 9 April 2025
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Author Correction: Methane oxidation to ethanol by a molecular junction photocatalyst Nature (IF 50.5) Pub Date : 2025-06-03
Jijia Xie, Cong Fu, Matthew G. Quesne, Jian Guo, Chao Wang, Lunqiao Xiong, Christopher D. Windle, Srinivas Gadipelli, Zheng Xiao Guo, Weixin Huang, C. Richard A. Catlow, Junwang TangCorrection to: Nature https://doi.org/10.1038/s41586-025-08630-x Published online 20 January 2025
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Convergent expansions of keystone gene families drive metabolic innovation in Saccharomycotina yeasts Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Kyle T. David, Joshua G. Schraiber, Johnathan G. Crandall, Abigail L. Labella, Dana A. Opulente, Marie-Claire Harrison, John F. Wolters, Xiaofan Zhou, Xing-Xing Shen, Marizeth Groenewald, Chris Todd Hittinger, Matt Pennell, Antonis RokasMany remarkable phenotypes have repeatedly occurred across vast evolutionary distances. When convergent traits emerge on the tree of life, they are sometimes driven by the same underlying gene families, while other times, many different gene families are involved. Conversely, a gene family may be repeatedly recruited for a single trait or many different traits. To understand the general rules governing
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Multiple cortical systems influence a single vibrissa muscle Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Aman Maharjan, Jason M. Guest, Jean-Alban Rathelot, Fiorella M. Gomez Osorio, Peter L. Strick, Marcel OberlaenderWhat is the neural substrate that enables the cerebral cortex to control a single mystacial vibrissa and orchestrate its movement? To answer this question, we injected rabies virus into the intrinsic muscle that protracts the rat C3 vibrissa and used retrograde transneuronal transport to identify the cortical neurons that influence the muscle. A surprisingly diverse set of cortical areas is the origin
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Single-cell resolution uncovers neighboring cell subtypes that share steroidogenic capacity during fetal testis development Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Keer Jiang, Zirui Fu, Philippos Tsourkas, Anbarasi Kothandapani, Tyler Kearse, Sean J. McIlwain, Chloé Mayère, Serge Nef, Joan S. JorgensenHistorically, endocrine cells were perceived to coordinate their output in a uniform manner. Recently however, single-cell technologies have uncovered heterogeneity within these populations, indicating that individual cells may operate as independently regulated units. Using high-resolution tools such as single-molecule fluorescent in situ hybridization (sm-FISH) and single-cell RNA sequencing (scRNA-seq)
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Increasing boreal fires reduce future global warming and sea ice loss Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Edward Blanchard-Wrigglesworth, Patricia DeRepentigny, Dargan M. W. FriersonBiomass burning can affect climate via the emission of aerosols and their subsequent impact on radiation, cloud microphysics, and surface and atmospheric albedo. Biomass burning emissions (BBEs) over the boreal region have strongly increased during the last decade and are expected to continue increasing as the climate warms. Climate models simulate aerosol processes, yet historical and future Coupled
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Disrupted diencephalon development and neuropeptidergic pathways in zebrafish with autism-risk mutations Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Mary E. S. Capps, Anna J. Moyer, Claire L. Conklin, Verdion Martina, Emma G. Torija-Olson, Morgan C. Klein, William C. Gannaway, Caleb C. S. Calhoun, Michael D. Vivian, Summer B. ThymeHundreds of human mutations are linked to autism and related disorders, yet the functions of many of these mutated genes during vertebrate neurodevelopment are unclear. We generated 27 zebrafish mutants with presumptive protein-truncating mutations or specific missense variants corresponding to autism-risk alleles in 17 human genes. We observed baseline and stimulus-driven behavioral changes at larval
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Reciprocal projections between the globus pallidus externa and cortex span motor and nonmotor regions Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Emily A. Ferenczi, Wengang Wang, Anushka Biswas, Trent Pottala, Yihuan Dong, Alison K. Chan, Madeline A. Albanese, Raina S. Sohur, Tingying Jia, Kevin J. Mastro, Bernardo L. SabatiniThe globus pallidus externa (GPe) is a heterogeneous nucleus of the basal ganglia, with intricate connections to other basal ganglia nuclei, as well as direct connections to the cortex. The anatomic, molecular, and electrophysiologic properties of cortex-projecting pallidocortical neurons are not well characterized. Here, we show that pallidocortical neurons project to diverse motor and nonmotor cortical
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BRCA2 reversion mutation–independent resistance to PARP inhibition through impaired DNA prereplication complex function Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Kyrie Pappas, Matteo Ferrari, Perianne Smith, Subhiksha Nandakumar, Zahra Khan, Serina B. Young, Justin LaClair, Marco Vincenzo Russo, Emmet Huang-Hobbs, Nikolaus Schultz, Wassim Abida, Wouter Karthaus, Maria Jasin, Charles L. SawyersRecent approvals of polymeric adenosine diphosphate ribose (poly(ADP-ribose) polymerase inhibitors (PARPi) for BRCA-mutant metastatic castration resistant prostate cancer necessitate an understanding of the factors that shape sensitivity and resistance. Reversion mutations that restore homologous recombination (HR) repair are detected in ~50 to 80% of BRCA-mutant patients who respond but subsequently
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CACNA1D is a circadian gene and causes familial advanced sleep phase Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
John M. Webb, Fayal Abderemane-Ali, Liza Ashbrook, Mingyang Ma, Neha Nibber, Xianlin Zou, Maya Yamazaki, Elizabeth Wohler, Nara Sobreira, Daniel L. Minor, Ying-Hui Fu, Louis J. PtáčekFamilial advanced sleep phase (FASP) is a heritable human sleep trait characterized by early sleep onset and offset times. We have identified five variants in five different families in the human voltage-gated calcium channel subunit alpha1 D ( CACNA1D ) that cosegregate with FASP. The variants in CACNA1D lead to altered channel dynamics in vitro. A mouse model of the E427K variant has a normal circadian
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Deciphering decomposition pathways of high explosives with cryogenic X-ray Raman spectroscopy Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Oscar A. Paredes Mellone, Michael H. Nielsen, Jeffrey Thomas Babicz, John Vinson, Trevor M. Willey, Dimosthenis SokarasWe employed cryogenic X-ray Raman spectroscopy to investigate the early-stage decomposition of the high explosive molecule hexanitrohexaazaisowurtzitane (CL-20). By systematically varying the radiation dose under cryogenic conditions, we induced the decomposition of the molecule using ionizing radiation and observed the evolution of spectral features at the carbon, nitrogen, and oxygen K edges. Through
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Population sequencing for phylogenetic diversity and transmission analyses Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Talima Pearson, Tara Furstenau, Colin Wood, Vanessa Rigas, Kylie Drake, Jason Sahl, Sara Maltinsky, Bart J. Currie, Mark Mayo, Carina Hall, Paul Keim, Viacheslav FofanovGenomic diversity in pathogen populations is foundational for evolution and adaptation. Understanding population-level diversity is also essential for tracking sources and revealing detailed pathways of transmission and spread. For bacteria, culturing, isolating, and sequencing the large number of individual colonies required to adequately sample diversity can be prohibitively time-consuming and expensive
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Study design and the sampling of deleterious rare variants in biobank-scale datasets Proc. Natl. Acad. Sci. U.S.A. (IF 9.4) Pub Date : 2025-06-03
Margaret C. Steiner, Daniel P. Rice, Arjun Biddanda, Mariadaria K. Ianni-Ravn, Christian Porras, John NovembreOne key component of study design in population genetics is the “geographic breadth” of a sample (i.e., how broad a region across which individuals are sampled). How the geographic breadth of a sample impacts observations of rare, deleterious variants is unclear, even though such variants are of particular interest for biomedical and evolutionary applications. Here, in order to gain insight into the